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Laboratoire d'Informatique Médicale > L'Equipe
L'Equipe
| | Annuaire du L.I.M. : | |
|  Responsable du LIM : |
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| | Chercheurs : |
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| | Les Secrétaires : |
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| | Liste des Projets : |
|  | 2002 - 2004 |
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 | AVOCADO
de Marc Cuggia, Anita Burgun, Andre Happe | | 2001 - 2005 |
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| Universite Medicale Virtuelle Francophone
de Pierre Le Beux, Anita Burgun, Franck Le Duff, Annie Fresnel, Marc Cuggia, Blaise Aurelien Kamendje, Fleur Mougin, Nicolas Garcelon, Tanguy Jehannin | | 1999 - 2002 |
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| SAMOTRAS
de A. Burgun, P. Le Beux, F. Le Duff, A. Happe | | 1999 - 2003 |
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| Ontologie de l'Etablissement Francais des Greffes
de A. Burgun, D. Delamarre |
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| | Liste des Articles : |
| | 2010 |
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| | Verification of parameters semantic compatibility for semi-automatic Web service composition: a generic case study
de Nicolas Lebreton, Christophe Blanchet, Daniela Barreiro Claro, Julie Chabalier, Anita Burgun and Olivier Dameron |
| | Achieving high research reporting quality through the use of computational ontologies
de Amrapali Zaveri, Luciana Cofiel, Jatin Shah, Shreyasee Pradhan, Edwin Chan, Olivier Dameron, Ricardo Pietrobon, and Beng Ti Ang |
| | Representing Diagnostic Criteria in DL Ontologies
de V Bertaud-Gounot, R Duvauferrier, A Burgun |
| | 2009 |
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| | Modeling cardiac rhythm and heart rate using BFO and DOLCE (Poster)
de Lynda Temal, Arnaud Rosier, Olivier Dameron & Anita Burgun |
| | Utilisation d'ontologies de tâches et de domaine pour la composition semi-automatique de services Web bioinformatiques
de Nicolas Lebreton, Christophe Blanchet, Julie Chabalier et Olivier Dameron |
| | A Hybrid System Using Symbolic and Numeric Knowledge for the Semantic Annotation of Sulco-Gyral Anatomy in Brain MRI Images
de Ammar Mechouche, Xavier Morandi, Christine Golbreich and Bernard Gibaud |
| | Guide de l’hygiène à l’usage des externes en odontologie
de V. Bertaud-Gounot, F. Richard |
| | Quantitative cross-species comparison of GO annotations: advantages and limitations of semantic similarity measure
de Dameron Olivier, Bettembourg, Charles, and Joret, Lea |
| | Santé bucco-dentaire des enfants de CP et CM2 de la ville de Rennes en 2007
de V. Bertaud-Gounot, C. Chevallier, S. Harel, F. Richard |
| | Ontology of dental emergencies for diagnostic classification
de Valérie Bertaud-Gounot, Frédérique Richard, Charles Le Moing, Régis Duvauferrier |
| | 2008 |
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| | Santé Bucco-dentaire des Enfants de CP et de CM2 de la ville de Rennes en 2007
de Bertaud-Gounot V., Chevallier C., Harel S., Richard F. |
| | Early Psa decrease-based nomogram to predict biochemical failure in patients with localized prostate cancer treated by radiotherapy only
de De Crevoisier R., Rossille D., Messai T., Bayat S., Bossi A., Burgun A., Rouzier R., Fizazi K. |
| | Semi-automatic composition of bioinformatics Web services based on task and domain ontologies
de Nicolas Lebreton, Olivier Dameron, Christophe Blanchet, Julie Chabalier |
| | Semantic enrichment of syntactic patterns to improve pathways and biological processes mapping
de Elodie Roques, Léa Joret, Julie Chabalier and Olivier Dameron |
| | A Hybrid System for the Semantic Annotation of Sulco-Gyral Anatomy in MRI Images
de Ammar Mechouche, Xavier Morandi, Christine Golbreich, and Bernard Gibaud |
| | Ontology-Based Annotation of Brain MRI Images
de Ammar Mechouche, Christine Golbreich, Xavier Morandi and Bernard Gibaud |
| | Iron-related transcriptomic variations in Caco-2 cells : in silico perspectives
de Aubry M, Monnier A, Chicault C, Galibert MD, Burgun A and Mosser J. |
| | Automatic Methods for Integrating Biomedical Data Sources in a Mediator-Based System
de Mougin F., Burgun A., Bodenreider O., Chabalier J., Loréal O., Le Beux P. |
| | Accessing and integrating data and knowledge for biomedical research.
de Burgun A, Bodenreider O |
| | “OAAT”, A NEW, SIMPLE AND POWERFUL INTERACTIVE TOOL FOR ECG ANALYSIS LEARNING
de Y. LESSARD, P. SIREGAR, N. JULEN, J-P. SINTEFF, F. HANNOUCHE, S. RIO, P. LE BEUX |
| | Determinants and patterns of Renin-Angiotensin system inhibitors’ prescription in the first year following kidney transplantation
de N. Thilly, S. Bayat, F. Alla, M. Kessler, S. Briançon, L. Frimat |
| | Integrating clinical, gene expression, protein expression and preanalytical data for in silico cancer research
de Rossille D., Burgun A., Pangault-Lhoro C., Fest T. |
| | Modelling access to renal transplantation waiting list in a French healthcare network using Bayesian method
de Sahar BAYAT, Marc CUGGIA, Michel KESSLER, Serge BRIANÇON, Pierre LE BEUX, Luc FRIMAT |
| | The Gene Regulation Ontology (GRO)
de Beisswanger E, Lee V, Splendiani A, Dameron O, Kim JJ, Rebholz-Schuhmann D, Hahn U. |
| | Managing an emergency department by analysing HIS Medical Data: a focus on elderly patient clinical pathways
de Rossille D., Cuggia M., Arnault A., Bouget J., Le Beux P. |
| | RDFScape: Semantic Web meets Systems Biology
de Splendiani A |
| | Intégration de données en recherche clinique: Etude sur les lymphomes
de Rossille D., Bayat S., Burgun A., Béné M-C., Fest T. |
| | A Unified Representation of Findings in Clinical Radiology using the UMLS and DICOM
de V. Bertaud-Gounot, J. Lasbleiz, F. Mougin, F. Marin, A. Burgun, R. Duvauferrier |
| | « META-ANALYSE » - Un outil d’analyse d’articles de radiologie sur le web
de N. Garcelon, V. Bertaud-Gounot, W. Saïd, F. Marin, R. Duvauferrier |
| | Utilisation d'ontologies de tâches et de domaine pour la composition semi-automatique de services Web bioinformatiques
de Nicolas Lebreton, Olivier Dameron, Christophe Blanchet, Julie Chabalier |
| | Enrichissement sémantique de patrons syntaxiques pour l'amélioration du mapping entre voies métaboliques et processus biologiques
de Elodie Roques, Julie Chabalier et Olivier Dameron |
| | 2007 |
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| | Grading glioma tumors using OWL-DL and NCI Thesaurus
de Marquet Gwenaëlle, Dameron Olivier, Saikali Stephan, Mosser Jean and Burgun Anita |
| | Exploiting HIS medical data resources to manage Emergency Department: Application to the study of elderly patients' clinical pathways
de Rossille D., Cuggia M., Arnault A., Bouget J., Le Beux P. |
| | A transversal approach to predict gene product networks from ontology-based similarity
de Chabalier J, Mosser J, Burgun A |
| | Towards an Hybrid System Using an Ontology Enriched by Rules for the Semantic Annotation of Brain MRI Images
de Ammar Mechouche, Christine Golbreich, Bernard Gibaud |
| | Vers un système hybride pour l’annotation sémantique d’images IRM du cerveau
de Ammar Mechouche, Christine Golbreich Bernard Gibaud |
| | Proceedings of the OWLED 2007 Workshop on OWL: Experiences and Directions, Innsbruck, Austria, June 6-7, 2007
de Christine Golbreich, Aditya Kalyanpur, Bijan Parsia |
| | The Value of Using Verbs in Medline Searches
de V. Bertaud-Gounot, W. Said, N. Garcelon, F. Marin, R. Duvauferrier |
| | Investigating subsumption in SNOMED CT: An exploration into large description logic-based biomedical terminologies.
de Bodenreider O, Smith B, Kumar A, Burgun A |
| | A method exploiting syntactic patterns and the UMLS semantics for aligning biomedical ontologies: The case of OBO disease ontologies.
de Marquet G, Mosser J, Burgun A |
| | OBO and OWL: Leveraging Semantic Web Technologies for the Life Sciences
de Christine Golbreich, Matthew Horridge, Ian Horrocks, Boris Motik, and Rob Shearer |
| | Integrating biological pathways in disease ontologies
de Chabalier J, Mosser J, Burgun A |
| | Integrating and querying disease and pathway ontologies: building an OWL model and using RDFS queries
de Chabalier J, Dameron O, Burgun A |
| | Using knowledge about pathways as an organizing principle for disease ontologies
de Chabalier J, Dameron O, Burgun A |
| | Méthodes de mapping situées aux niveaux instance et schéma pour l'intégration de sources de données hétérogènes
de Mougin F, Chabalier J, Bodenreider O, Burgun A |
| | An objective method for bed capacity planning in a hospital department - a comparison with target ratio methods
de Nguyen JM, Six P, Chaussalet T, Antonioli D, Lombrail P, Le Beux P |
| | Virtual biomedical universities and e-learning
de Le Beux P, Fieschi M |
| | Toward a Decision Support System for optimizing clinical pathways of elderly in an Emergency Department
de Cuggia M, Rossille D, Arnaud A, Bouget J, Le Beux P. |
| | Querying multiple sources with OWL ontologies: an exploratory study in an automotive company
de P. Mariot, JP. Cotton, C Golbreich, A. Berger, F Vexler, |
| | The OBO to OWL mapping, GO to OWL 1.1!
de Christine Golbreich, Ian Horrocks |
| | Automatic generation of consistency constraints for an OWL representation of the FMA
de Olivier Dameron and Julie Chabalier |
| | Computerizing the radiological sign
de V. Bertaud-Gounot, I. Belhadj, O. Dameron, N. Garcelon, L. Hendaoui, F. Marin, R. Duvauferrier |
| | The Genopolis Microarray Database
de Splendiani A, Brandizi B, Even G, Beretta O, Pavelka N, Pelizzola M, Foti M, Mauri G, Ricciardi-Castagnoli P |
| | Bio-Ontologies in the context of the BOOTStrep project
de Splendiani A, Beisswanger E, Kink J-J, Lee V, Dameron O, Rebholz-Schuhmann D |
| | An integrated approach to distance learning with digital video in the French-speaking Virtual Medical University
de Dufour JC, Cuggia M, Soula G, Spector M, Kohler F. |
| | Doc’UMVF: two search tools to provide quality-controlled teaching resources in French to students and teachers
de Cuggia M, Soualmia L, Garcelon N, Darmoni S. |
| | An Internet supported workflow for the publication process in UMVF (French Virtual Medical University)
de Renard JM, Cuggia M, Bourde M, Garcelon N, Souf N, Darmoni S, Le Beux P, Beuscart R, Jean-Marc Brunetaud. |
| | Etat de Santé Bucco-Dentaire et Besoins de Traitements des Patients en Hôpital Psychiatrique
de V. Bertaud-Gounot, C. Lesquibe, F. Richard |
| | Issues in Integrating Epidemiology and Research Information in Oncology: Experience with ICD-O3 and the NCI Thesaurus.
de Burgun A, Bodenreider O |
| | - Computer simulation and medical education : complementary tools for the third millennium.
de Y. LESSARD, P. SIREGAR, N. JULEN, J-P. SINTEFF, P. LE BEUX. |
| | Modélisation et simulation au service de l'enseignement médical : Campus Numérique de Physiologie
de Y. LESSARD, P. SIREGAR, N. JULEN, J-P. SINTEFF, P. LE BEUX |
| | Campus Numérique de Physiologie : un complément nécessaire à l’enseignement médical.
de Y. LESSARD, P. SIREGAR, N. JULEN, J-P. SINTEFF, P. LE BEUX |
| | 2006 |
|---|
| | Semantic description of brain MRI images
de Ammar Mechouche, Christine Golbreich, Bernard Gibaud |
| | Problem-based learning in medical informatics for undergraduate medical students: An experiment in two medical schools.
de Burgun A, Darmoni S, Duff FL, Weber J. |
| | Web rules for Health Care and Life Sciences: use cases and requirements
de Christine Golbreich |
| | Grading lung tumors using OWL-DL based reasoning
de Olivier Dameron, Elodie Roques, Daniel Rubin, Gwenaelle Marquet, Anita Burgun |
| | Combining evidence, biomedical literature and statistical dependence: new insights for functional annotation of gene sets
de Aubry M, Monnier A, Chicault C, de Tayrac M, Galibert MD, Burgun A, Mosser J. |
| | Evidence in pharmacovigilance: extracting Adverse Drug Reactions articles from MEDLINE to link them to case databases
de Garcelon N, Mougin F, Bousquet C, Burgun A |
| | Retrieving findings in Medline citations: a method using WordNet verbs
de V. Bertaud-Gounot, W. Said, N. Garcelon, F. Marin, R. Duvauferrier |
| | Using WordNet to Improve the Mapping of Data Elements to UMLS for Data Sources Integration.
de Mougin F, Burgun A, Bodenreider O. |
| | Mapping data elements to terminological resources for integrating biomedical data sources
de Mougin F, Burgun A, Bodenreider O. |
| | Towards a Specialized Knowledge Base in Medicine: The BIKiNi (BIomedical Knowledge Network) project
de V. Bertaud-Gounot, N. Garcelon, F. Marin, A. Burgun, I. Belhadj, R. Duvauferrier |
| | A model for a regional health information network sharing clinical information between professionals in Britanny
de Cuggia M, Herry N, Rossille D, Lepage E, Edan G, Le Beux P. |
| | Meta analyse de PubMed en Imagerie Médicale
de N. Garcelon, V. Bertaud-Gounot, M. Cuggia, R. Duvauferrier, P. Le Beux |
| | Vers une Représentation Formelle de la Sémiologie en Médecine
de R. Duvauferrier, V. Bertaud-Gounot , I. Belhadj, L. Hendaoui, N. Garcelon |
| | Enrichissement de la hiérarchie KEGG par l'exploitation de Gene Ontology
de Chabalier J, Marquet G, Dameron O, Burgun A |
| | Etat de santé bucco-dentaire et besoins de traitements des patients en Hôpital Psychiatrique : Premiers résultats
de V. Bertaud-Gounot, C. Lesquibe, F. Richard |
| | Le carnet de santé bucco-dentaire des résidents en EHPA(D)
de H. Prigent, V. Bertaud-Gounot, F. Richard |
| | "Campus Numérique de Physiologie" : learning from multimedia
de Y. LESSARD, P. SIREGAR, N. JULEN, J-P. SINTEFF, P. LE BEUX |
| | Ontology based data analysis
de Splendiani A |
| | Monoclonal gammopathies of undetermined significance and their progression over time
de Decaux O, Cuggia M, Ruelland A, Cazalets C, Cador B, Jego P, Grosbois B. |
| | Medical and non-medical determinants of access to renal transplant waiting list in a French community-based network of care.
de Bayat S, Frimat L, Thilly N, Loos C, Briançon S, Kessler M. |
| | Des ressources multimedia pour l’enseignement de la Physiologie.
de Y. LESSARD, P. SIREGAR, N. JULEN, J-P. SINTEFF, P. LE BEUX. |
| | Multimedia and Physiology : a new way to ensure the quality of medical education and medical knowledge
de Y. LESSARD, P. SIREGAR, N. JULEN, J-P. SINTEFF, P. LE BEUX |
| | Data integration through data elements: Mapping data elements to terminological resources
de Mougin F, Burgun A, Bodenreider O |
| | Using ontologies linked with geometric models to reason about penetrating injuries
de Daniel L. Rubin, Olivier Dameron, Yasser Bashir, David Grossman, Parvati Dev, and Mark A. Musen |
| | Éliminer les cycles dans les systèmes terminologiques : comparaison de deux approches
de Mougin F, Bodenreider O. |
| | Combining biomedical knowledge and trasncriptomic data to extract new knowledge on genes
de Emilie Guerin and Gwenaelle Marquet, Julie Chabalier, Marie-Berengère Troadec, Christiane Guguen-Guillouzo, Olivier Loréal, Anita Burgun and Fouzia Moussouni |
| | Changing Kidney Allocation Policy in France: the Value of Simulation
de Christian Jacquelinet MD PhD, Benoît Audry, Christine Golbreich PU PhD, Corinne Antoine MD, Jean-Michel Rebibou MD PhD, Jacky Claquin MD, Bernard Loty MD. |
| | Classification des compte-rendus mammographiques a partir d'une ontologie radiologique en OWL
de Amel Boustil, Sahnoun Zaidi, Mansouri Ziad , Christine Golbreich |
| | Desiderata for domain reference ontologies in biomedicine.
de Burgun A |
| | Amplification of Terminologia anatomica by French language terms using Latin terms matching algorithm: A prototype for other language.
de Fabry P, Baud R, Burgun A, Lovis C. |
| | Foundational Model of Anatomy in OWL: experience and perspectives
de C. Golbreich, S. Zhang, O. Bodenreider |
| | Combining content-based retrieval and description logics reasoning
de Christine Golbreich |
| | 2005 |
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| | BIKiNi, Biomedical Knowledge Network
de V. Bertaud-Gounot, J. Lasbleiz, N. Garcelon, F. Mougin, A. Burgun, R. Duvauferrier |
| | Can DICOM Content Mapping Resource be enhanced by UMLS Semantic Network?
de J. Lasbleiz, V. Bertaud-Gounot, F. Mougin, A. Burgun, R. Duvauferrier |
| | Construction d’une Base de Connaissance Biomédicale Utilisant la Méthode des Scripts
de V. Bertaud-Gounot, J. Lasbleiz, R. Duvauferrier, N. Garcelon, F. Mougin, A. Burgun |
| | Indexing method of digital audiovisual medical resources with semantic Web integration
de Cuggia M, Mougin F, Le Beux P. |
| | Ontologies and Information Models: Comparing the UMLS and the DICOM Content Mapping Resource
de J. Lasbleiz, V. Bertaud-Gounot, F. Mougin, A. Burgun, R. Duvauferrier |
| | Ontology based anaysis of experimental data
de Splendiani A |
| | Managing educational resource in medicine: system design and integration
de Pouliquen B, Le Duff F, Delamarre D, Cuggia M, Mougin F, Le Beux P. |
| | An Improved Publication Process for the UMVF
de Renard JM, Brunetaud JM, Cuggia M, Darmoni S, Le Beux P, Beuscart R. |
| | Nouveaux modes d'acquisition des connaissances médicales : le Campus Numérique de Physiologie
de Y. LESSARD, P. SIREGAR, N. JULEN, J-P. SINTEFF, P. LE BEUX |
| | What reasoning support for Ontology and Rules? the brain anatomy case study
de Christine Golbreich, Olivier Dameron, Olivier Bierlaire, Bernard Gibaud |
| | The Foundational Model of Anatomy in OWL: experience and perspectives
de Christine Golbreich, Songmao Zhang, Olivier Bodenreider |
| | Challenges in converting frame-based ontology into OWL: the Foundational Model of Anatomy case-study
de Olivier Dameron, Daniel L. Rubin, and Mark A. Musen |
| | Keeping modular and platform-independent software up-to-date: benefits from the Semantic Web
de Olivier Dameron |
| | Implementation of atlas-matching capabilities using Web Services technology: lessons learned from the development of a demonstrator
de Bernard Gibaud, Olivier Dameron, Éric Poiseau, and Pierre Jannin |
| | Using OWL and Description Logics based classification for reasoning in biomedical applications
de Daniel L. Rubin, Olivier Dameron, and Mark A. Musen |
| | Use of description logic classification to reason about consequences of penetrating injuries
de Daniel L. Rubin, Olivier Dameron, and Mark A. Musen |
| | A transversal approach to compute semantic similarity between genes
de Chabalier J., Garcelon N., Aubry M., Burgun A. |
| | Modelling a decision support system for oncology using rule-based and case-based reasoning methodologies
de Rossille D, Laurent JF, Burgun A |
| | Virtu@l Consult@tion: An Interactive Learning Environment for Remote Medical Learning
de Elizabeth Medelez Ortega, Anita Burgun, Pierre Le Beux |
| | Virtu@l Consult@tion: An Interactive and Multimedia Environment for Remote Clinical Reasoning Learning in Cardiology
de E Medelez Ortega, Y Lessard, A Burgun, P Le Beux |
| | Approaches to eliminating cycles in the UMLS Metathesaurus: Naïve vs. formal
de Mougin F, Bodenreider O. |
| | GEDAW : un environnement integre pour l?analyse du transcriptome.
de Guerin E., Chabalier J., Marquet G., Burgun A., Loreal O., Moussouni F. |
| | Analyse de donnees transcriptomiques par une approche transversale
de Chabalier J., Burgun A. |
| | ISYMOD: a knowledge warehouse for the identification, assembly and analysis of bacterial integrated systems
de Chabalier J., Capponi C., Quentin Y., Fichant G. |
| | Assisting medical annotation in Swiss-Prot using statistical classifiers.
de P.B. Dobrokhotov, C. Goutte, A.-L. Veuthey, E. Gaussier. |
| | Technologies de l'Information et de la Communication integrees a l'enseignement medical
de Elizabeth Medelez Ortega, Yvon Lessard, Pierre Le Beux |
| | Non-lexical approaches to identifying associative relations in the gene ontology.
de Bodenreider O, Aubry M, Burgun A. |
| | Toward a unified representation of findings in clinical radiology.
de Bertaud-Gounot V, Lasbleiz J, Mougin F, Marin F, Burgun A, Duvauferrier R. |
| | Vertebral trabecular network analysis on CT images
de Lasbleiz J, Burgun A, Marin F, Rolland Y, Duvauferrier R. |
| | UMLF: a unified medical lexicon for French.
de Zweigenbaum P, Baud R, Burgun A, Namer F, Jarrousse E, Grabar N, Ruch P, Le Duff F, Forget JF, Douyere M, Darmoni S. |
| | Linking the Gene Ontology to other biological ontologies
de Bodenreider O, Burgun A |
| | An ontology of chemical entities helps identify dependence relations among Gene Ontology terms.
de Burgun A, Bodenreider O |
| | Biomedical ontologies.
de Bodenreider O, Burgun A. |
| | Classifying diseases with respect to anatomy: a study in SNOMED CT.
de Burgun A, Bodenreider O, Mougin F. |
| | Issues in the classification of disease instances with ontologies.
de Burgun A, Bodenreider O, Jacquelinet C. |
| | Use Case: Ontology with Rules for identifying brain anatomical structures
de Christine Golbreich, Olivier Bierlaire, Olivier Dameron, Bernard Gibaud |
| | Migrating the FMA from Protege to OWL
de Christine Golbreich, Songmao Zhang, Olivier Bodenreider |
| | From Frame Based Ontologies to OWL: the FMA migration
de Christine Golbreich, Songmao Zhang, Olivier Bodenreider |
| | 2004 |
|---|
| | Intégration de Données Médicales sur la Greffe et la Dialyse pour l'Epidémiologie et la Décision en Santé Publique
de , C. Jacquelinet, S. Mercier, C. Couchoud, C. Golbreich |
| | Evolving from standard vocabularies to formal ontology for an information system dedicated to organ transplantation.
de Burgun A, Golbreich C, Jacquelinet C. |
| | Corpus-Based vs. Model-Based Selection of Relevant Features.
de C. Goutte, P.B. Dobrokhotov, E. Gaussier, A.-L. Veuthey. |
| | A power law global error model for the identification of differntially expressed genes in microarray data
de Pavelka N, Pelizzola M, Vizzardelli C, Capozzoli M, Splendiani A, Granucci F, Ricciardi-Castagnoli P |
| | Mortality rates in rural and urban areas of Brittany
de Grimaud O, Bayat S, Chaperon J. |
| | Création et développement d'un campus numérique de Physiologie
de Y. LESSARD, P. SIREGAR, N. JULEN, J-P. SINTEFF, P. LE BEUX |
| | Numeric and symbolic representation of the cerebral cortex anatomy: Methods and preliminary results
de Olivier Dameron, Bernard Gibaud, and Xavier Morandi |
| | Using semantic dependencies for consistency management of an ontology of brain-cortex anatomy
de Olivier Dameron, Bernard Gibaud, and Mark Musen |
| | Accessing and manipulating ontologies using web services
de Olivier Dameron, Natalya F. Noy, Holger Knublauch, and Mark A. Musen |
| | JOT: a scripting environment for creating and managing ontologies
de Olivier Dameron |
| | Vers une generation automatique du mapping de sources biomedicales
de Fleur Mougin, Christine Golbreich, Anita Burgun, Pierre Le Beux |
| | Towards the automatic generation of biomedical sources schema
de Fleur Mougin, Anita Burgun, Olivier Loreal, Pierre Le Beux |
| | Representing the MeSH in OWL: Towards a semi-automatic migration
de Lina Soualmia, Christine Golbreich, Stefan Darmoni |
| | Combining SWRL rules and OWL ontologies with Protege OWL Plugin, Jess, and Racer
de Christine Golbreich, Atsutoshi Imai |
| | Biomedical Information Integration, a hot issue
de Christine Golbreich et al. |
| | Lexicographie et recherche d'informations medicales par croisement de langues : une approche socioterminologique d'un lexique trilingue
de Tuan Duc Tran, Nicolas Garcelon, Denis Delamare, Pierre Le Beux |
| | Aligning knowledge sources in the UMLS: methods, quantitative results, and applications
de Bodenreider O, Burgun A |
| | Construction of the dialysis and transplantation ontology: advantages, limits, and questions about Protege OWL
de C. Golbreich, S. Mercier |
| | Investigating subsumption in DL-based terminologies: a case-study in SNOMED-CT
de Bodenreider O, Smith B, Kumar A, Burgun A |
| | Challenges for Knowledge Management in the Biomedical Domain
de Christine Golbreich |
| | The Ontology-Epistemology Divide: A Case Study in Medical Terminology
de Bodenreider O, Smith B, Burgun A |
| | MeSH and Specialized Terminologies : Coverage in the Field of Molecular Biology.
de Vincent Mary, Gwenaelle Marquet, Pierre Le Beux |
| | From functional similarity among gene products to dependence relations among Gene Ontology terms
de Bodenreider O, Aubry M, Burgun A |
| | Combining problem-based learning and information technology: an experiment with third-year medical students
de Burgun A, Darmoni SJ, Le Duff F, Weber J. |
| | Experiments in cross-language medical information retrieval using a mixing translation module.
de Tran TD, Garcelon N, Burgun A, Le Beux P. |
| | Conception d?un environnement collaboratif multimedia pour des seances d?apprentissage du raisonnement clinique gerees a distance
de Elizabeth Medelez Ortega |
| | EPU Virtuel : Modelisation d?un Enseignement Post Universitaire virtuel centre sur l?apprenant
de Marc Cuggia, Olivier Decaux, Charles Honnorat, Elizabeth Medelez, Pierre Le Beux |
| | Experiment in Virtu@l Consult@tion, a Collaborative and Multimedia Learning Environment based on simulation in Medicine
de Elizabeth Medelez Ortega, Marc Cuggia, Patrick Le Cuziat, Charles Honnorat, Pierre Le Beux |
| | A Meta search engine for medical students using the French Medical Virtual University
de Nicolas Garcelon, Marc Cuggia, Stefan Darmoni, Pierre Le Beux |
| | Predicting Survival Causes After Out of Hospital Cardiac Arrest using Data Mining Method
de Franck Le Duff, Cristian Muntean, Marc Cuggia, Philippe Mabo |
| | Dependence relations in Gene Ontology: a preliminary study
de Burgun A, Bodenreider O, Aubry M, Mosser J |
| | Combining Rule and Ontology Reasoners for the Semantic Web
de Christine Golbreich |
| | Aide à la décision en odontologie : Méthode de modélisation des connaissances à partir de textes pour une application aux pathologies de la muqueuse buccale
de V. Bertaud-Gounot |
| | 2003 |
|---|
| | La classification récursive dans AROM
de Chabalier J, Fichant G, Capponi C |
| | Web ontology language requirements w.r.t expressiveness of taxononomy and axioms in medecine
de Golbreich C, Dameron O, Gibaud B, Burgun A |
| | Combining NLP and probabilistic categorisation for document and term selection for Swiss-Prot medical annotation
de P.B. Dobrokhotov, C. Goutte, A.-L. Veuthey, E. Gaussier. |
| | Medical pedagogical resources management.Stud Health Technol Inform.
de Pouliquen B, Le Duff F, Delamarre D, Cuggia M, Mougin F, Le Beux P. |
| | Vectocardiographie et genèse de l'ECG : un CD-ROM pour l'enseignement
de Y. LESSARD, P. LE BEUX |
| | Medical advisor, un professeur virtuel dédié à l'approche pédagogique par problèmes
de P. SIREGAR, N. JULEN, J-P. SINTEFF, Y. LESSARD |
| | Tracing computerized incidents to manage and improve quality health care in hospitals.
de Le Duff F, Daniel S, Kamendje B, Duvauferrier R. |
| | Method for automatic management of the semantic network ambiguity in the UMLS: possible application for information retrieval on the Web
de Mary V, Le Duff F, Mougin F, Le Beux P. |
| | Indexing method of digital audiovisual medical resources with semantic Web integration.
de Cuggia M, Mougin F, Le Beux P. |
| | Deployment of heterogeneous resources of genomic, biological and medical knowledge on the liver to build a datawarehouse
de Emilie GUERIN, Gwenaelle MARQUET, Fouzia MOUSSOUNI, Anita BURGUN, Fleur MOUGIN, Olivier LOREAL |
| | Biomedical Information Integration: two case-studies
de Golbreich C., Jacquelinet C., Burgun A. |
| | Catégorisation de documents PubMed pour l'annotation médicale dans Swiss-Prot.
de C. Goutte, P. Dobrokhotov, E. Gaussier et A.-L. Veuthey. |
| | How to represent medical ontologies in view of a Semantic Web
de Golbreich C, Dameron O, Gibaud B, Burgun A |
| | Comment representer les ontologies pour un Web Semantique Medical ?
de Golbreich C, Dameron O, Gibaud B, Burgun A |
| | Automatic concept extraction from spoken medical reports
de Happe A, Pouliquen B, Burgun A, Cuggia M, Le Beux P |
| | Use of metadata for biomedical heterogeneous data sources integration
de Fleur Mougin, Gwenaelle Marquet, Anita Burgun, Emilie Guerin, Fouzia Moussouni and Olivier Loreal |
| | Biological and medical ontology-based annotation of genes in the context of transcriptome analysis
de Gwenaelle Marquet, Emilie Guerin, Anita Burgun, Fouzia Moussouni , Fleur Mougin and Olivier Loreal |
| | Designing a Collaborative and Multimedia Learning Environment for Medical Simulation-based Training
de Elizabeth Medelez Ortega, Anita Burgun, Pierre Le Beux |
| | Developing the ontological foundations of a terminological system for end-stage diseases, organ failure, dialysis and transplantation
de Jacquelinet C, Burgun A, Delamarre D, Strang N, Djabbour S, Boutin B, Le Beux P. |
| | From an ontology-based search engine towards a more flexible integration for medical and biological information
de Marquet G., Golbreich C., Burgun A. |
| | Challenges for Biomedical Information Integration
de Golbreich C, Burgun A |
| | Virtu@l Consult@tion : Interet de l'enseignement collaboratif multimedia a distance pour les seances d'Apprentissage du Raisonnement Clinique
de Elizabeth Medelez Ortega, Anita Burgun, Yvon Lessard, Pierre Le Beux |
| | Vers un moteur de recherche evoluee de documents multimedia par le contenu
de Golbreich C. |
| | Acquisition semi-automatique de terminologie bilingue en biologie moleculaire a partir des corpus comparables
de Tuan Duc Tran, Anita Burgun, Nicolas Garcelon |
| | Evaluation of WordNet as a source of lay knowledge for molecular biology and genetic diseases: A feasibility study
de Bodenreider O, Burgun A, Mitchell JA |
| | Modelling dependencies between relations to ensure consistency of a cerebral cortex anatomy knowledge base
de Dameron O, Burgun A, Morandi X, Gibaud B |
| | A contextual coding system for transplantation and end stage diseases
de Jacquelinet C., Burgun A., Djabbour S., Delamarre D., Clerc P., Boutin B., Le Beux P. |
| | Modelling of a case-based retrieval system for oncology
de Rossille D., Laurent J.F., Burgun A. |
| | Towards a Unified Medical Lexicon for French
de Zweigenbaum P., Baud R., Burgun A., Namer F., Jarrousse E., Grabar N., Ruch P., Le Duff F.,Thirion B., Darmoni S. |
| | BioMeKe : an ontology-based biomedical knowledge extraction system devoted to transcriptome analysis
de Marquet G., Burgun A., Moussouni F., Guerin E., Le Duff F., Loreal O. |
| | Development of an indexing search engine for the UMVF : Proposal for an indexing method based on Dublin Core and XML
de Fleur Mougin, Marc Cuggia, Pierre Le Beux |
| | Les metadonnees dans le cadre du Web semantique : applications au domaine biomedical
de Fleur Mougin, Anita Burgun, Pierre Le Beux |
| | Collaborative Environment for Clinical Reasoning and Distance Learning Sessions
de Elizabeth Medelez Ortega, Anita Burgun, Franck Le Duff, Pierre Le Beux |
| | Virtu@l Consult@tion : Un Environnement Collaboratif pour la Simulation des Seances d?Apprentissage du Raisonnement Clinique Multimedia a Distance
de Elizabeth Medelez Ortega, Anita Burgun, Yvon Lessard, Pierre Le Beux |
| | A probabilistic information retrieval approach to medical annotation in SWISS-PROT.
de P.B. Dobrokhotov, C. Goutte, A.-L. Veuthey, E. Gaussier. |
| | 2002 |
|---|
| | Strategies for the identification, the assembly and the classification of integrated biological systems in completely sequenced genomes
de Quentin Y, Chabalier J, Fichant G |
| | Assessing the consistency of a biomedical terminology through lexical knowledge
de Bodenreider O, Burgun A, Rindflesch TC |
| | Design considerations for an ontology in the domain of organ failure and transplantation
de Jacquelinet C, Burgun A, Delamarre D, Strang N, Boutin B, Le Beux P |
| | Unsupervised, corpus-based method for extending a biomedical terminology
de Bodenreider O., Rindflesch TC, Burgun A |
| | Characterizing the definitions of anatomical concepts in WordNet and specialized sources.
de Bodenreider O, Burgun A |
| | Towards a sharable numeric and symbolic knowledge base on cerebral cortex anatomy : lessons learned from a prototype
de Dameron O, Gibaud B, Burgun A, Morandi X |
| | Representation of roles in biomedical ontologies : a case study in functional genomics
de Burgun A, Bodenreider O, Le Duff F, Moussouni F, Loreal O |
| | Respective contribution of MIAME, GeneOntology and UMLS for transcriptome analysis
de Moussouni F, Burgun A, Le Duff F, Guerin E, Loreal O. |
| | Combining voice recognition and automatic indexing of medical reports
de Happe A, Pouliquen B, Burgun A, Cuggia M, Le Beux P. |
| | Integration of Electronic Resources and Communication Technologies during Clinical Reasoning Learning Sessions
de Elizabeth Medelez, Anita Burgun, Franck Le Duff, Pierre Le Beux |
| | Automatic Conceptual Indexing of French Pharmaceutical Theses
de Vincent MARY, Bruno POULIQUEN, Franck LE DUFF, Stefan J. DARMONI |
| | Indexation Automatique Conceptuelle de Theses Pharmaceutiques Francaises.
de Vincent Mary, Bruno Pouliquen, Franck Le Duff, Stefan Darmoni , Alain Segui , Pierre Le Beux |
| | Simulation Collaborative Multimedia a Distance de Seances d'Apprentissage du Raisonnement Clinique
de Elizabeth Medelez Ortega, Anita Burgun, Pierre Le Beux |
| | Les systemes de sante francais et anglais: evolution comparee depuis le milieu des annees 90
de L. Laplace, B.Kamendje, J.Nizard, J.M. Coz , J. Chaperon |
| | An integrative approach of biomedical knowledge via ontologies for liver transcriptome analysis
de Marquet G, Burgun A, Moussouni F, Guerin E, Loreal O |
| | Dynamic simulations with a 3D computational model of heart for teaching pharmacology
de Y. LESSARD, N. JULEN, J-P. SINTEFF, P. LE BEUX, P. SIREGAR |
| | 2001 |
|---|
| | A Knowledge Base for Biological Integrated Systems
de Capponi C, Chabalier J, Quentin Y, Fichant G |
| | La surveillance des baceries multiresistantes au CHU de Caen
de THIBON P., BORGEY F., KAMENDJE B. QUIGNETTE L., DUFETELLE C., BERNET C., LE COUTOUR X., FINES M., LECLERCQ R., D'ALCHER-GAUTIER M.J. |
| | Dynamic simulations with a 3D computational model of heart for teaching physiology and cardiology
de Y. Lessard, J. P. Sinteff, N. Julen, P. Le Beux and P. Siregar |
| | An experience in teaching pharmacology on the internet.
de Allain H, Galesne G, Fresnel A, Tribut O, Le Duff F, Schuck S, Le Cavorzin P, Mauduit N, Le Beux P. |
| | DIAMED: a probabilistic diagnostic aid system on the web.
de Cleret M, Le Duff F, Fresnel A, Le Beux P. |
| | Aggregating UMLS semantic types for reducing conceptual complexity
de McCray AT, Burgun A, Bodenreider O |
| | Methods for exploring the semantics of the relationships between co-occurring UMLS concepts.
de Burgun A, Bodenreider O |
| | Issues in the design of medical ontologies used for knowledge sharing
de Burgun A, Botti G, Fieschi M, Le Beux P |
| | Lexically-suggested hyponymic relations among medical terms and their representation in the UMLS
de Bodenreider O, Burgun A, Rindflesch TC |
| | Aspects of the taxonomic relation in the biomedical domain
de Burgun A, Bodenreider O |
| | Mapping the UMLS Semantic Network into general ontologies
de Burgun A, Bodenreider O |
| | A cognitive approach for designing a computer-based learning tool in dentistry: ODONTOS application.
de Barac'h V, Shleyer T, Le Duff F, Le Beux P. |
| | Design of a CSCL environment for clinical reasoning learning and problem-based learning in medicine.
de Elizabeth Medelez, Anita Burgun, Franck Le Duff, Pierre Le Beux |
| | Sharing medical data for patient path analysis with data mining method.
de Le Duff F, Happe A, Burgun A, Levionnois S, Bremond M, Le Beux P. |
| | Comparing terms, concepts and semantic classes in WordNet and the Unified Medical Language System
de Burgun A, Bodenreider O |
| | A CD-ROM for teaching : "Vectorcardiography and genesis of EKG"
de Y. LESSARD |
| | 2000 |
|---|
| | Knowledge acquisition to quality Unified Medical Language System interconceptual relationships.
de Le Duff F, Burgun A, Cleret M, Pouliquen B, Barac'h V, Le Beux P. |
| | The elderly. Demography, economic and social aid, health and social services
de Josseran L, Le Duff F, Chaperon J. |
| | Analyse epidemiologique clinique et institutionelle de la prise en charge sur deux structures extrahospitalieres en psychiatrie
de C.FOUQUERE, B.KAMENDJE TCHOKOBOU, N.UGUEN, T. ARESU |
| | Building the ontological foundations of a terminology from Natural Language to Conceptual Graphs with Ribosome, a knowledge extraction system
de Jacquelinet C, Burgun A |
| | Vers l'integration des NTIC dans une approche pedagogique par problemes en medecine
de Burgun A., Le Duff F., Fresnel A., Siregar P., Julen N., Grosbois B., Le Beux P |
| | The French Virtual Medical University.
de Le Beux P, Le Duff F, Fresnel A, Berland Y, Beuscart R, Burgun A, Brunetaud JM, Chatellier G, Darmoni S, Duvauferrier R, Fieschi M, Gillois P, Guille F, Kohler F, Pagonis D, Pouliquen B, Soula G, Weber J. |
| | 1999 |
|---|
| | Automatic enrichment of the unified medical language system starting from the ADM knowledge base.
de Le Duff F, Burgun A, Pouliquen B, Delamarre D, Le Beux P. |
| | Health status and its effects on the work of national education nurses
de Batt A, Le Duff F, Trouve F et coll. |
| | A method for an automated decomposition of a complex term into its conceptual components.
de Barac'h V, Burgun A, Delamarre D, Le Beux P. |
| | 1998 |
|---|
| | Analysis of medical catalog terms using the MAOUSSC model: application to Gyncecology-Obstetrics
de Leveque J, Burgun A, Foucher F, Leveque JM, Grall JY, Le Beux P |
| | A collaborative approach to building a terminology for medical procedures using a Web-based application: from specifications to daily use
de Burgun A, Bodenreider O, Denier P, Delamarre D, Botti G, Oberlin P, Leveque JM, Bremond M, Fieschi M, Le Beux P |
| | A first evaluation of a pedagogical network for medical students at the University Hospital of Rennes.
de Fresnel A, Jarno P, Burgun A, Delamarre D, Denier P, Cleret M, Courtin C, Seka LP, Pouliquen B, Cleran L, Riou C, Le Duff F, Lesaux H, Duvauferrier R, Le Beux P. |
| | Evaluation of the Unified Medical Language System as a medical knowledge source
de Bodenreider O, Burgun A, Botti G, Fieschi M, Le Beux P, Kohler F |
| | 1997 |
|---|
| | A network of web multimedia medical information servers for a medical school and university hospital.
de Denier P, Le Beux P, Delamarre D, Fresnel A, Cleret M, Courtin C, Seka LP, Pouliquen B, Cleran L, Riou C, Burgun A, Jarno P, Le Duff F, Lesaux H, Duvauferrier R. |
| | A Web terminology server using UMLS for the description of medical procedures
de Burgun A, Denier P, Bodenreider O, Botti G, Delamarre D, Pouliquen B |
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